Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | FBD94_14885 | Not Available | Positive | 3779758 - 3780189 | 16311.7 |
| gnat family n-acetyltransferase | FBD94_14890 | Not Available | Negative | 3780192 - 3780647 | 17348.6 |
| hypothetical protein | FBD94_14895 | Not Available | Negative | 3780784 - 3781299 | 19497.2 |
| duf4382 domain-containing protein | FBD94_14900 | Not Available | Negative | 3781340 - 3782140 | 27703.5 |
| hypothetical protein | FBD94_14905 | Not Available | Positive | 3782387 - 3782593 | 7870.77 |
| hypothetical protein | FBD94_14910 | Not Available | Positive | 3782604 - 3783446 | 31096.5 |
| response regulator transcription factor | FBD94_14915 | Not Available | Positive | 3783458 - 3784132 | 26140.7 |
| hamp domain-containing histidine kinase | FBD94_14920 | Not Available | Positive | 3784134 - 3785453 | 50770.4 |
| insulinase family protein | FBD94_14925 | Not Available | Negative | 3785499 - 3788321 | 107023.0 |
| abc transporter | FBD94_14930 | Not Available | Negative | 3788318 - 3790579 | 83524.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

