Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | FBD94_14785 | Not Available | Negative | 3760105 - 3760545 | 16546.0 |
| hypothetical protein | FBD94_14790 | Not Available | Positive | 3760972 - 3761643 | 25153.3 |
| hypothetical protein | FBD94_14795 | Not Available | Positive | 3761645 - 3762283 | 23524.3 |
| hypothetical protein | FBD94_14800 | Not Available | Positive | 3762352 - 3762942 | 23165.5 |
| dabb family protein | FBD94_14805 | Not Available | Positive | 3763053 - 3763373 | 12241.5 |
| protease | FBD94_14810 | Not Available | Positive | 3763383 - 3763910 | 19017.7 |
| sdr family oxidoreductase | FBD94_14815 | Not Available | Positive | 3764047 - 3764907 | 30917.2 |
| dna topoisomerase ib | FBD94_14820 | Not Available | Negative | 3764913 - 3765953 | 39619.1 |
| hypothetical protein | FBD94_14825 | Not Available | Negative | 3766056 - 3766634 | 22473.4 |
| hypothetical protein | FBD94_14830 | Not Available | Negative | 3766757 - 3766963 | 7997.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

