Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_14735 | Not Available | Negative | 3744319 - 3744597 | 10486.3 |
| hypothetical protein | FBD94_14740 | Not Available | Negative | 3745306 - 3749463 | 152495.0 |
| hypothetical protein | FBD94_14745 | Not Available | Negative | 3749469 - 3749843 | 13980.2 |
| hypothetical protein | FBD94_14750 | Not Available | Negative | 3749854 - 3753000 | 119556.0 |
| gliding motility protein gldn | FBD94_14755 | Not Available | Negative | 3753359 - 3754306 | 35910.1 |
| gliding motility protein gldm | FBD94_14760 | Not Available | Negative | 3754315 - 3755856 | 54903.7 |
| gliding motility protein gldl | FBD94_14765 | Not Available | Negative | 3755904 - 3756707 | 28676.1 |
| gliding motility-associated lipoprotein | FBD94_14770 | Not Available | Negative | 3756757 - 3758124 | 51018.9 |
| uroporphyrinogen-iii synthase | FBD94_14775 | Not Available | Negative | 3758293 - 3759063 | 29442.3 |
| duf4271 domain-containing protein | FBD94_14780 | Not Available | Negative | 3759081 - 3760073 | 37952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

