Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_14580 | Not Available | Negative | 3700052 - 3703969 | 142586.0 |
| pkd domain-containing protein | FBD94_14585 | Not Available | Negative | 3704010 - 3706544 | 92671.9 |
| hypothetical protein | FBD94_14590 | Not Available | Negative | 3708302 - 3708517 | 7662.6 |
| duf4139 domain-containing protein | FBD94_14595 | Not Available | Positive | 3708669 - 3710288 | 60269.3 |
| aaa family atpase | FBD94_14600 | Not Available | Negative | 3710311 - 3711507 | 45771.4 |
| atp synthase f1 subunit gamma | FBD94_14605 | Not Available | Negative | 3711642 - 3712526 | 32185.9 |
| f0f1 atp synthase subunit alpha | FBD94_14610 | Not Available | Negative | 3712551 - 3714125 | 56741.6 |
| atp synthase f1 subunit delta | FBD94_14615 | Not Available | Negative | 3714183 - 3714731 | 19733.1 |
| f0f1 atp synthase subunit b | FBD94_14620 | Not Available | Negative | 3714766 - 3715260 | 18664.8 |
| atp synthase f0 subunit c | FBD94_14625 | Not Available | Negative | 3715338 - 3715547 | 6513.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

