Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_01385 | Not Available | Positive | 386650 - 387864 | 45031.1 |
| glycoside hydrolase family 95 protein | FBD94_01390 | Not Available | Positive | 387803 - 390055 | 85422.9 |
| glycoside hydrolase family 95 protein | FBD94_01395 | Not Available | Positive | 390058 - 392397 | 87082.2 |
| alpha-galactosidase | FBD94_01400 | Not Available | Positive | 392441 - 394456 | 75124.9 |
| alpha-galactosidase | FBD94_01405 | Not Available | Positive | 394485 - 396695 | 83834.7 |
| 9-o-acetylesterase | FBD94_01410 | Not Available | Positive | 396726 - 398726 | 73048.3 |
| glycoside hydrolase family 27 protein | FBD94_01415 | Not Available | Positive | 398736 - 399965 | 45722.6 |
| solute:sodium symporter family transporter | FBD94_01420 | Not Available | Negative | 399981 - 401585 | 58708.1 |
| hypothetical protein | FBD94_01425 | Not Available | Positive | 402110 - 403576 | 52277.4 |
| t9ss type b sorting domain-containing protein | FBD94_01430 | Not Available | Positive | 403658 - 408379 | 161412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

