Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | FBD94_14480 | Not Available | Positive | 3682463 - 3683173 | 26599.1 |
| hypothetical protein | FBD94_14485 | Not Available | Positive | 3683216 - 3683863 | 24571.3 |
| apolipoprotein n-acyltransferase | FBD94_14490 | Not Available | Positive | 3683874 - 3685493 | 60574.5 |
| nad+ synthase | FBD94_14495 | Not Available | Negative | 3685490 - 3687130 | 60740.5 |
| port family protein | FBD94_14500 | Not Available | Negative | 3687228 - 3687896 | 24385.2 |
| gliding motility lipoprotein gldb | FBD94_14505 | Not Available | Positive | 3687953 - 3688981 | 40238.2 |
| 2-phosphosulfolactate phosphatase | FBD94_14510 | Not Available | Negative | 3688962 - 3689693 | 26801.2 |
| glycine cleavage system aminomethyltransferase gcvt | FBD94_14515 | Not Available | Negative | 3689735 - 3690814 | 39463.2 |
| glycosyltransferase | FBD94_14520 | Not Available | Negative | 3690856 - 3692058 | 46393.6 |
| ribonuclease hii | FBD94_14525 | Not Available | Negative | 3692077 - 3692688 | 22879.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

