Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyltransferase | FBD94_14380 | Not Available | Positive | 3656728 - 3657642 | 32540.4 |
| 3-dehydroquinate synthase | FBD94_14385 | Not Available | Positive | 3657654 - 3658832 | 43554.0 |
| xylose isomerase | FBD94_14390 | Not Available | Positive | 3658834 - 3660042 | 45860.5 |
| alkaline phosphatase family protein | FBD94_14395 | Not Available | Positive | 3660058 - 3661410 | 51057.0 |
| phospholipase c, phosphocholine-specific | FBD94_14400 | Not Available | Positive | 3661508 - 3663892 | 89312.4 |
| isoleucyl-trna synthetase | FBD94_14405 | Not Available | Negative | 3663873 - 3664139 | 9965.5 |
| divalent metal cation transporter | FBD94_14410 | Not Available | Negative | 3664202 - 3665380 | 40999.0 |
| 5-oxoprolinase subunit pxpa | FBD94_14415 | Not Available | Negative | 3665385 - 3666152 | 27340.5 |
| biotin-dependent carboxyltransferase family protein | FBD94_14420 | Not Available | Negative | 3666158 - 3667114 | 34596.4 |
| 5-oxoprolinase subunit pxpb | FBD94_14425 | Not Available | Negative | 3667104 - 3667811 | 25510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

