Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | FBD94_14230 | Not Available | Negative | 3617508 - 3617981 | 17093.5 |
| phosphoglycerate dehydrogenase | FBD94_14235 | Not Available | Negative | 3618140 - 3619063 | 34093.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | FBD94_14240 | Not Available | Negative | 3619101 - 3619883 | 29655.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | FBD94_14245 | Not Available | Positive | 3619983 - 3621062 | 39135.0 |
| duf177 domain-containing protein | FBD94_14250 | Not Available | Positive | 3621122 - 3621655 | 20348.3 |
| 50s ribosomal protein l32 | FBD94_14255 | Not Available | Positive | 3621677 - 3621868 | 7136.55 |
| phosphate acyltransferase plsx | FBD94_14260 | Not Available | Positive | 3621968 - 3622906 | 33580.9 |
| ketoacyl-acp synthase iii | FBD94_14265 | Not Available | Positive | 3622919 - 3623908 | 35786.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | FBD94_14270 | Not Available | Positive | 3623981 - 3624448 | 16853.4 |
| acetyl-coa carboxylase biotin carboxylase subunit | FBD94_14275 | Not Available | Positive | 3624470 - 3625810 | 49502.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

