Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3597095 - 3597170 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3597244 - 3597315 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3597356 - 3597431 | Not Available |
| gtpase era | FBD94_14145 | Not Available | Positive | 3597543 - 3598430 | 33814.9 |
| ribosome biogenesis gtpase der | FBD94_14150 | Not Available | Positive | 3598515 - 3599816 | 49056.4 |
| s41 family peptidase | FBD94_14155 | Not Available | Negative | 3599825 - 3601405 | 58875.6 |
| n-acetylmuramic acid 6-phosphate etherase | FBD94_14160 | Not Available | Positive | 3601669 - 3602487 | 29395.3 |
| hypothetical protein | FBD94_14165 | Not Available | Positive | 3602502 - 3603074 | 22960.7 |
| bax inhibitor-1/ycca family protein | FBD94_14170 | Not Available | Positive | 3603123 - 3603875 | 27214.9 |
| hypothetical protein | FBD94_14175 | Not Available | Positive | 3604061 - 3604720 | 25086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

