Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FBD94_13625 | Not Available | Negative | 3448637 - 3449161 | 20321.5 |
| chrd domain-containing protein | FBD94_13630 | Not Available | Positive | 3449272 - 3449820 | 19333.1 |
| Trna-asn | Not Available | Not Available | Positive | 3450040 - 3450116 | Not Available |
| hypothetical protein | FBD94_13640 | Not Available | Positive | 3450307 - 3450546 | 8990.73 |
| hypothetical protein | FBD94_13645 | Not Available | Positive | 3450550 - 3451185 | 24086.3 |
| hypothetical protein | FBD94_13650 | Not Available | Negative | 3451665 - 3452069 | 15400.3 |
| is1182 family transposase | FBD94_13655 | Not Available | Negative | 3451949 - 3453148 | 45769.0 |
| hypothetical protein | FBD94_13660 | Not Available | Positive | 3453384 - 3453659 | 10706.0 |
| sigma-70 family rna polymerase sigma factor | FBD94_13665 | Not Available | Positive | 3453822 - 3454439 | 24273.2 |
| duf4974 domain-containing protein | FBD94_13670 | Not Available | Positive | 3454499 - 3455458 | 36303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

