Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | FBD94_13575 | Not Available | Positive | 3438299 - 3439189 | 34992.6 |
| alcohol dehydrogenase | FBD94_13580 | Not Available | Negative | 3439186 - 3440199 | 36212.4 |
| pirin family protein | FBD94_13585 | Not Available | Negative | 3440218 - 3441114 | 33584.5 |
| hypothetical protein | FBD94_13590 | Not Available | Negative | 3441157 - 3442515 | 51984.2 |
| hypothetical protein | FBD94_13595 | Not Available | Negative | 3442496 - 3444349 | 69092.5 |
| hypothetical protein | FBD94_13600 | Not Available | Negative | 3444375 - 3445052 | 25304.0 |
| duf3078 domain-containing protein | FBD94_13605 | Not Available | Negative | 3445121 - 3446017 | 34072.4 |
| cytochrome b5 | FBD94_13610 | Not Available | Positive | 3446692 - 3446931 | 9277.93 |
| sugar kinase | FBD94_13615 | Not Available | Negative | 3446993 - 3447913 | 33750.7 |
| Trna-asn | Not Available | Not Available | Positive | 3448055 - 3448131 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

