Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | FBD94_13525 | Not Available | Positive | 3425806 - 3427512 | 63393.6 |
| lps export abc transporter atp-binding protein | FBD94_13530 | Not Available | Positive | 3427522 - 3428256 | 27471.4 |
| gh3 auxin-responsive promoter family protein | FBD94_13535 | Not Available | Positive | 3428278 - 3429786 | 58439.7 |
| cbs domain-containing protein | FBD94_13540 | Not Available | Positive | 3429875 - 3430303 | 15933.5 |
| peptidase m13 | FBD94_13545 | Not Available | Negative | 3430459 - 3432504 | 75935.1 |
| arac family transcriptional regulator | FBD94_13550 | Not Available | Negative | 3432553 - 3433011 | 17132.1 |
| rna polymerase sigma-70 factor | FBD94_13555 | Not Available | Positive | 3433132 - 3433740 | 23956.6 |
| fecr family protein | FBD94_13560 | Not Available | Positive | 3433810 - 3434799 | 37282.5 |
| tonb-dependent receptor | FBD94_13565 | Not Available | Positive | 3434842 - 3437487 | 98066.6 |
| duf4249 domain-containing protein | FBD94_13570 | Not Available | Positive | 3437491 - 3438288 | 29494.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

