Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | FBD94_13375 | Not Available | Positive | 3392775 - 3394478 | 63510.0 |
| gfo/idh/moca family oxidoreductase | FBD94_13380 | Not Available | Positive | 3394478 - 3395638 | 42311.0 |
| sugar phosphate isomerase/epimerase | FBD94_13385 | Not Available | Positive | 3395645 - 3396703 | 39633.6 |
| c-type cytochrome | FBD94_13390 | Not Available | Positive | 3396713 - 3397123 | 14266.2 |
| gfo/idh/moca family oxidoreductase | FBD94_13395 | Not Available | Positive | 3397167 - 3398624 | 53644.7 |
| duf1080 domain-containing protein | FBD94_13400 | Not Available | Positive | 3398674 - 3399369 | 25691.2 |
| mfs transporter | FBD94_13405 | Not Available | Positive | 3399402 - 3400616 | 44515.4 |
| hydroxypyruvate isomerase | FBD94_13410 | Not Available | Positive | 3400628 - 3401509 | 32721.6 |
| sugar phosphate isomerase/epimerase | FBD94_13415 | Not Available | Positive | 3401520 - 3402398 | 32711.1 |
| aspartate-semialdehyde dehydrogenase | FBD94_13420 | Not Available | Positive | 3402549 - 3403541 | 36146.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

