Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | FBD94_13325 | Not Available | Positive | 3381786 - 3383276 | 54887.6 |
| beta-glucosidase | FBD94_13330 | Not Available | Positive | 3383337 - 3384707 | 51791.2 |
| beta-glucosidase bglx | FBD94_13335 | Not Available | Positive | 3384739 - 3387042 | 83891.0 |
| hypothetical protein | FBD94_13340 | Not Available | Negative | 3387345 - 3387791 | 17077.1 |
| hypothetical protein | FBD94_13345 | Not Available | Positive | 3388456 - 3388899 | 17190.4 |
| hypothetical protein | FBD94_13350 | Not Available | Positive | 3388932 - 3389114 | 6906.52 |
| phospholipase | FBD94_13355 | Not Available | Positive | 3389193 - 3389978 | 29434.3 |
| yebc/pmpr family dna-binding transcriptional regulator | FBD94_13360 | Not Available | Negative | 3389990 - 3390715 | 27195.0 |
| nad-dependent epimerase/dehydratase family protein | FBD94_13365 | Not Available | Negative | 3390874 - 3391818 | 35387.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | FBD94_13370 | Not Available | Positive | 3392082 - 3392753 | 24533.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

