Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit | FBD94_13025 | Not Available | Negative | 3287225 - 3289738 | 92274.7 |
| uroporphyrinogen-iii c-methyltransferase | FBD94_13030 | Not Available | Positive | 3290014 - 3290751 | 26566.7 |
| hypothetical protein | FBD94_13035 | Not Available | Negative | 3290742 - 3291644 | 35389.0 |
| flotillin family protein | FBD94_13040 | Not Available | Positive | 3291809 - 3293692 | 69395.4 |
| carbonic anhydrase | FBD94_13045 | Not Available | Positive | 3293729 - 3294352 | 22997.8 |
| hypothetical protein | FBD94_13050 | Not Available | Positive | 3294502 - 3294714 | 7975.93 |
| amino acid permease | FBD94_13055 | Not Available | Negative | 3294831 - 3296537 | 61260.4 |
| sodium-translocating pyrophosphatase | FBD94_13060 | Not Available | Negative | 3296716 - 3299022 | 79970.6 |
| amino acid permease | FBD94_13065 | Not Available | Positive | 3299657 - 3301108 | 52609.3 |
| helicase | FBD94_13070 | Not Available | Negative | 3301287 - 3303203 | 71723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

