Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | FBD94_01235 | Not Available | Positive | 307487 - 308560 | 39431.7 |
| n-acetylmuramic acid 6-phosphate etherase | FBD94_01240 | Not Available | Positive | 308606 - 309424 | 29617.9 |
| beta-n-acetylhexosaminidase | FBD94_01245 | Not Available | Positive | 309448 - 311289 | 69887.3 |
| hypothetical protein | FBD94_01250 | Not Available | Positive | 311305 - 313023 | 63538.2 |
| sugar mfs transporter | FBD94_01255 | Not Available | Positive | 313029 - 314288 | 44824.1 |
| n-acetylglucosamine kinase | FBD94_01260 | Not Available | Positive | 314304 - 315149 | 31319.4 |
| alpha-n-acetylglucosaminidase | FBD94_01265 | Not Available | Positive | 315207 - 317447 | 86604.1 |
| glycoside hydrolase | FBD94_01270 | Not Available | Positive | 317454 - 318527 | 39907.8 |
| 1,4-beta-xylanase | FBD94_01275 | Not Available | Positive | 318650 - 319660 | 38753.0 |
| gntr family transcriptional regulator | FBD94_01280 | Not Available | Negative | 319778 - 320752 | 37861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

