Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moad/this family protein | FBD94_12975 | Not Available | Negative | 3275324 - 3275557 | 8727.59 |
| radical sam protein | FBD94_12980 | Not Available | Negative | 3275562 - 3276524 | 35603.2 |
| sulfite exporter taue/safe family protein | FBD94_12985 | Not Available | Negative | 3276524 - 3277255 | 25916.8 |
| rubredoxin | FBD94_12990 | Not Available | Negative | 3277258 - 3278553 | 49799.4 |
| nad(p)h-nitrite reductase | FBD94_12995 | Not Available | Negative | 3278750 - 3282265 | 130617.0 |
| nark family nitrate/nitrite mfs transporter | FBD94_13000 | Not Available | Negative | 3282283 - 3283593 | 46609.0 |
| molybdopterin molybdotransferase moea | FBD94_13005 | Not Available | Negative | 3283656 - 3284852 | 43441.2 |
| bifunctional molybdenum cofactor biosynthesis protein moac/moab | FBD94_13010 | Not Available | Negative | 3284855 - 3285769 | 32763.0 |
| dinucleotide-utilizing protein | FBD94_13015 | Not Available | Negative | 3285773 - 3286930 | 43041.4 |
| nitrite reductase small subunit nird | FBD94_13020 | Not Available | Negative | 3286864 - 3287208 | 12632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

