Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | FBD94_12925 | Not Available | Positive | 3264924 - 3265235 | 11671.8 |
| glycoside hydrolase | FBD94_12930 | Not Available | Positive | 3265239 - 3268025 | 103122.0 |
| glycosyl hydrolase | FBD94_12935 | Not Available | Negative | 3268058 - 3268993 | 35557.3 |
| alpha-l-arabinofuranosidase | FBD94_12940 | Not Available | Negative | 3269070 - 3271079 | 75534.4 |
| gntr family transcriptional regulator | FBD94_12945 | Not Available | Positive | 3271271 - 3272302 | 39266.2 |
| marc family protein | FBD94_12950 | Not Available | Negative | 3272304 - 3272873 | 20564.2 |
| crp/fnr family transcriptional regulator | FBD94_12955 | Not Available | Positive | 3273183 - 3273869 | 25825.4 |
| hypothetical protein | FBD94_12960 | Not Available | Negative | 3273875 - 3274234 | 12618.5 |
| molybdenum cofactor guanylyltransferase | FBD94_12965 | Not Available | Negative | 3274295 - 3274858 | 21112.8 |
| molybdenum cofactor biosynthesis protein moae | FBD94_12970 | Not Available | Negative | 3274855 - 3275322 | 17316.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

