Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | FBD94_12875 | Not Available | Positive | 3246215 - 3247954 | 64115.3 |
| fasciclin domain-containing protein | FBD94_12880 | Not Available | Positive | 3247997 - 3249493 | 55745.7 |
| susc/raga family tonb-linked outer membrane protein | FBD94_12885 | Not Available | Positive | 3249512 - 3252706 | 116570.0 |
| ragb/susd family protein | FBD94_12890 | Not Available | Positive | 3252724 - 3254436 | 64640.8 |
| hypothetical protein | FBD94_12895 | Not Available | Positive | 3254477 - 3255730 | 45816.3 |
| hypothetical protein | FBD94_12900 | Not Available | Positive | 3255741 - 3257885 | 81182.5 |
| glycoside hydrolase family 28 protein | FBD94_12905 | Not Available | Positive | 3257970 - 3259391 | 52179.4 |
| hypothetical protein | FBD94_12910 | Not Available | Positive | 3259395 - 3261776 | 87774.6 |
| rhamnogalacturonan lyase | FBD94_12915 | Not Available | Positive | 3261826 - 3263640 | 65653.1 |
| glycoside hydrolase family 88 protein | FBD94_12920 | Not Available | Positive | 3263774 - 3264907 | 43283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

