Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | FBD94_12725 | Not Available | Positive | 3202191 - 3203945 | 66539.4 |
| amino acid permease | FBD94_12730 | Not Available | Negative | 3204432 - 3206387 | 71664.4 |
| m3 family oligoendopeptidase | FBD94_12735 | Not Available | Negative | 3206391 - 3208106 | 66528.1 |
| 4-hydroxybenzoate octaprenyltransferase | FBD94_12740 | Not Available | Negative | 3208112 - 3208978 | 32231.0 |
| yiha family ribosome biogenesis gtp-binding protein | FBD94_12745 | Not Available | Negative | 3208992 - 3209621 | 23816.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | FBD94_12750 | Not Available | Positive | 3209674 - 3210405 | 27529.4 |
| port family protein | FBD94_12755 | Not Available | Positive | 3210395 - 3211129 | 27974.6 |
| sdr family nad(p)-dependent oxidoreductase | FBD94_12760 | Not Available | Positive | 3211206 - 3211961 | 27563.4 |
| gatb/yqey domain-containing protein | FBD94_12765 | Not Available | Positive | 3211973 - 3212419 | 16313.2 |
| alpha/beta hydrolase | FBD94_12770 | Not Available | Positive | 3212536 - 3213300 | 28862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

