Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | FBD94_12625 | Not Available | Positive | 3166355 - 3168604 | 84713.7 |
| glycosyl hydrolase | FBD94_12630 | Not Available | Positive | 3168613 - 3171231 | 99335.5 |
| sugar mfs transporter | FBD94_12635 | Not Available | Positive | 3171311 - 3172738 | 52009.2 |
| chromosome partitioning protein para | FBD94_12640 | Not Available | Positive | 3172885 - 3174741 | 72530.2 |
| tonb-dependent receptor | FBD94_12645 | Not Available | Positive | 3175370 - 3178513 | 114661.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_12650 | Not Available | Positive | 3178568 - 3180487 | 71933.3 |
| duf4959 domain-containing protein | FBD94_12655 | Not Available | Positive | 3180507 - 3181730 | 45134.1 |
| duf5013 domain-containing protein | FBD94_12660 | Not Available | Positive | 3181746 - 3183101 | 49564.0 |
| glycosyl transferase | FBD94_12665 | Not Available | Positive | 3183133 - 3184911 | 65805.3 |
| thua domain-containing protein | FBD94_12670 | Not Available | Positive | 3184926 - 3185696 | 29064.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

