Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3107805 - 3107879 | Not Available |
| elongation factor tu | FBD94_12380 | Not Available | Positive | 3107995 - 3109182 | 43055.0 |
| Trna-trp | Not Available | Not Available | Positive | 3109293 - 3109366 | Not Available |
| preprotein translocase subunit sece | FBD94_12390 | Not Available | Positive | 3109377 - 3109574 | 7316.95 |
| transcription termination/antitermination factor nusg | FBD94_12395 | Not Available | Positive | 3109584 - 3110126 | 20655.2 |
| 50s ribosomal protein l11 | FBD94_12400 | Not Available | Positive | 3110215 - 3110658 | 15552.9 |
| 50s ribosomal protein l1 | FBD94_12405 | Not Available | Positive | 3110682 - 3111380 | 24505.9 |
| 50s ribosomal protein l10 | FBD94_12410 | Not Available | Positive | 3111382 - 3111903 | 18751.7 |
| 50s ribosomal protein l7/l12 | FBD94_12415 | Not Available | Positive | 3111967 - 3112341 | 12770.3 |
| dna-directed rna polymerase subunit beta | FBD94_12420 | Not Available | Positive | 3112495 - 3116298 | 142310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

