Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | FBD94_12325 | Not Available | Positive | 3101065 - 3101592 | 19041.4 |
| acyl-coa dehydrogenase | FBD94_12330 | Not Available | Positive | 3101810 - 3102982 | 42382.0 |
| hypothetical protein | FBD94_12335 | Not Available | Negative | 3103062 - 3103433 | 14139.3 |
| 30s ribosomal protein s21 | FBD94_12340 | Not Available | Positive | 3103585 - 3103779 | 7549.43 |
| response regulator | FBD94_12345 | Not Available | Negative | 3103834 - 3105630 | 68433.3 |
| integrase | FBD94_12350 | Not Available | Positive | 3105965 - 3106849 | 33919.1 |
| ribosome-associated translation inhibitor raia | FBD94_12355 | Not Available | Positive | 3106864 - 3107211 | 13327.1 |
| Trna-thr | Not Available | Not Available | Positive | 3107419 - 3107491 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3107530 - 3107615 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3107648 - 3107723 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

