Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | FBD94_12275 | Not Available | Positive | 3087599 - 3087889 | 11102.2 |
| ribonuclease y | FBD94_12280 | Not Available | Positive | 3088250 - 3089812 | 58427.8 |
| duf962 domain-containing protein | FBD94_12285 | Not Available | Positive | 3089897 - 3090421 | 20325.4 |
| tonb-dependent receptor | FBD94_12290 | Not Available | Positive | 3090535 - 3093336 | 103365.0 |
| t9ss c-terminal target domain-containing protein | FBD94_12295 | Not Available | Positive | 3093435 - 3094859 | 49413.9 |
| hypothetical protein | FBD94_12300 | Not Available | Negative | 3094926 - 3096128 | 47145.4 |
| duf2306 domain-containing protein | FBD94_12305 | Not Available | Positive | 3096416 - 3096976 | 21200.8 |
| yarhg domain-containing protein | FBD94_12310 | Not Available | Positive | 3096973 - 3097851 | 33316.5 |
| lysophospholipid acyltransferase family protein | FBD94_12315 | Not Available | Negative | 3098005 - 3099756 | 66859.8 |
| hypothetical protein | FBD94_12320 | Not Available | Positive | 3100157 - 3101062 | 35026.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

