Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | FBD94_12225 | Not Available | Negative | 3077864 - 3078886 | 36757.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | FBD94_12230 | Not Available | Negative | 3078974 - 3080500 | 55658.4 |
| hypothetical protein | FBD94_12235 | Not Available | Positive | 3080932 - 3081141 | 7339.95 |
| phosphoribosylglycinamide formyltransferase | FBD94_12240 | Not Available | Negative | 3081145 - 3081723 | 22123.7 |
| superoxide dismutase | FBD94_12245 | Not Available | Positive | 3081933 - 3082670 | 26737.5 |
| 30s ribosomal protein s20 | FBD94_12250 | Not Available | Positive | 3082864 - 3083118 | 9645.08 |
| dna repair protein radc | FBD94_12255 | Not Available | Positive | 3083204 - 3083902 | 25587.2 |
| endonuclease/exonuclease/phosphatase family protein | FBD94_12260 | Not Available | Positive | 3083926 - 3084768 | 31912.4 |
| phenylalanine--trna ligase subunit beta | FBD94_12265 | Not Available | Positive | 3084858 - 3087257 | 88140.6 |
| hypothetical protein | FBD94_12270 | Not Available | Positive | 3087277 - 3087567 | 10786.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

