Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | FBD94_12175 | Not Available | Negative | 3068458 - 3069228 | 28865.2 |
| abc transporter permease | FBD94_12180 | Not Available | Negative | 3069237 - 3070046 | 29294.9 |
| hypothetical protein | FBD94_12185 | Not Available | Positive | 3070361 - 3070726 | 14018.1 |
| ferritin | FBD94_12190 | Not Available | Positive | 3070830 - 3071357 | 20461.0 |
| thymidine kinase | FBD94_12195 | Not Available | Negative | 3071604 - 3072185 | 21573.0 |
| hypothetical protein | FBD94_12200 | Not Available | Positive | 3072284 - 3073234 | 36205.7 |
| rod shape-determining protein roda | FBD94_12205 | Not Available | Negative | 3073227 - 3074495 | 47238.5 |
| penicillin-binding protein 2 | FBD94_12210 | Not Available | Negative | 3074492 - 3076447 | 72676.5 |
| rod shape-determining protein mred | FBD94_12215 | Not Available | Negative | 3076447 - 3076962 | 19943.2 |
| rod shape-determining protein mrec | FBD94_12220 | Not Available | Negative | 3076955 - 3077791 | 30976.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

