Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_11825 | Not Available | Negative | 2968053 - 2970893 | 107440.0 |
| response regulator transcription factor | FBD94_11830 | Not Available | Positive | 2971012 - 2971629 | 22814.1 |
| hypothetical protein | FBD94_11835 | Not Available | Negative | 2971784 - 2974090 | 90108.0 |
| hypothetical protein | FBD94_11840 | Not Available | Negative | 2974020 - 2975021 | 38460.6 |
| hpp family protein | FBD94_11845 | Not Available | Positive | 2975174 - 2975764 | 21489.0 |
| thua domain-containing protein | FBD94_11850 | Not Available | Negative | 2975773 - 2976510 | 27515.9 |
| hypothetical protein | FBD94_11855 | Not Available | Negative | 2976545 - 2976898 | 13645.5 |
| single-stranded dna-binding protein | FBD94_11860 | Not Available | Positive | 2977129 - 2977545 | 15988.2 |
| tonb-dependent receptor | FBD94_11865 | Not Available | Negative | 2977542 - 2979608 | 77082.4 |
| nadp-dependent isocitrate dehydrogenase | FBD94_11870 | Not Available | Positive | 2979810 - 2982029 | 79980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

