Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation initiator family protein | FBD94_11725 | Not Available | Negative | 2944482 - 2944781 | 12015.5 |
| duf4974 domain-containing protein | FBD94_11730 | Not Available | Positive | 2944927 - 2945985 | 40158.9 |
| susc/raga family tonb-linked outer membrane protein | FBD94_11735 | Not Available | Positive | 2946023 - 2949490 | 127149.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | FBD94_11740 | Not Available | Positive | 2949512 - 2951101 | 59102.6 |
| hypothetical protein | FBD94_11745 | Not Available | Positive | 2951113 - 2952102 | 35797.1 |
| hypothetical protein | FBD94_11750 | Not Available | Positive | 2952135 - 2953463 | 47563.9 |
| duf5009 domain-containing protein | FBD94_11755 | Not Available | Positive | 2953460 - 2954653 | 44119.3 |
| sigma-70 family rna polymerase sigma factor | FBD94_11760 | Not Available | Negative | 2954650 - 2955240 | 23581.6 |
| phosphopyruvate hydratase | FBD94_11765 | Not Available | Negative | 2955372 - 2956667 | 46249.9 |
| aquaporin z | FBD94_11770 | Not Available | Negative | 2956813 - 2957505 | 23373.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

