Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase | FBD94_11675 | Not Available | Positive | 2931755 - 2932729 | 37548.7 |
| ribonucleoside-diphosphate reductase subunit alpha | FBD94_11680 | Not Available | Positive | 2932835 - 2935213 | 89006.1 |
| hypothetical protein | FBD94_11685 | Not Available | Positive | 2935328 - 2935531 | 7698.21 |
| carboxypeptidase regulatory-like domain-containing protein | FBD94_11690 | Not Available | Positive | 2935588 - 2938122 | 95062.7 |
| carbon-nitrogen hydrolase | FBD94_11695 | Not Available | Positive | 2938172 - 2939041 | 32636.6 |
| agmatine deiminase family protein | FBD94_11700 | Not Available | Positive | 2939051 - 2940151 | 41656.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | FBD94_11705 | Not Available | Positive | 2940161 - 2940904 | 26282.7 |
| hypothetical protein | FBD94_11710 | Not Available | Negative | 2940957 - 2941691 | 28052.0 |
| vwa domain-containing protein | FBD94_11715 | Not Available | Positive | 2941775 - 2943862 | 77503.1 |
| trimeric intracellular cation channel family protein | FBD94_11720 | Not Available | Positive | 2943874 - 2944485 | 22119.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

