Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | FBD94_11425 | Not Available | Negative | 2874255 - 2875493 | 46299.4 |
| hypothetical protein | FBD94_11430 | Not Available | Positive | 2875693 - 2876031 | 12906.8 |
| sulp family inorganic anion transporter | FBD94_11435 | Not Available | Positive | 2876109 - 2877713 | 57364.5 |
| carbonic anhydrase | FBD94_11440 | Not Available | Positive | 2877720 - 2878391 | 24598.6 |
| hypothetical protein | FBD94_11445 | Not Available | Positive | 2878550 - 2878741 | 6915.88 |
| l-glutamate gamma-semialdehyde dehydrogenase | FBD94_11450 | Not Available | Negative | 2878859 - 2880487 | 59632.2 |
| tetraacyldisaccharide 4'-kinase | FBD94_11455 | Not Available | Positive | 2880606 - 2881667 | 40034.7 |
| purine-nucleoside phosphorylase | FBD94_11460 | Not Available | Positive | 2881639 - 2882454 | 30085.7 |
| hypothetical protein | FBD94_11465 | Not Available | Positive | 2882454 - 2884481 | 77654.9 |
| asparagine synthetase b | FBD94_11470 | Not Available | Negative | 2884478 - 2885740 | 47742.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

