Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | FBD94_11325 | Not Available | Positive | 2857347 - 2857865 | 18047.1 |
| 50s ribosomal protein l30 | FBD94_11330 | Not Available | Positive | 2857870 - 2858049 | 6607.36 |
| 50s ribosomal protein l15 | FBD94_11335 | Not Available | Positive | 2858161 - 2858607 | 15593.9 |
| preprotein translocase subunit secy | FBD94_11340 | Not Available | Positive | 2858611 - 2859948 | 48232.4 |
| type i methionyl aminopeptidase | FBD94_11345 | Not Available | Positive | 2859958 - 2860743 | 28479.0 |
| translation initiation factor if-1 | FBD94_11350 | Not Available | Positive | 2860815 - 2861033 | 8308.24 |
| 50s ribosomal protein l36 | FBD94_11355 | Not Available | Positive | 2861035 - 2861151 | 4518.77 |
| 30s ribosomal protein s13 | FBD94_11360 | Not Available | Positive | 2861236 - 2861613 | 14116.3 |
| 30s ribosomal protein s11 | FBD94_11365 | Not Available | Positive | 2861635 - 2862024 | 13802.8 |
| 30s ribosomal protein s4 | FBD94_11370 | Not Available | Positive | 2862090 - 2862698 | 22941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

