Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | FBD94_11170 | Not Available | Negative | 2836440 - 2837852 | 53897.6 |
| arsenate reductase | FBD94_11175 | Not Available | Positive | 2838071 - 2838418 | 13135.8 |
| carboxypeptidase regulatory-like domain-containing protein | FBD94_11180 | Not Available | Positive | 2838492 - 2839229 | 27921.9 |
| hypothetical protein | FBD94_11190 | Not Available | Negative | 2841565 - 2842200 | 23686.4 |
| duf2132 domain-containing protein | FBD94_11195 | Not Available | Positive | 2842316 - 2842537 | 8706.61 |
| acyloxyacyl hydrolase | FBD94_11200 | Not Available | Positive | 2842569 - 2843699 | 41865.6 |
| 30s ribosomal protein s12 | FBD94_11205 | Not Available | Positive | 2843869 - 2844282 | 15095.5 |
| 30s ribosomal protein s7 | FBD94_11210 | Not Available | Positive | 2844299 - 2844766 | 17603.6 |
| elongation factor g | FBD94_11215 | Not Available | Positive | 2844784 - 2846898 | 77788.0 |
| 30s ribosomal protein s10 | FBD94_11220 | Not Available | Positive | 2846958 - 2847263 | 11418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

