Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | FBD94_11120 | Not Available | Positive | 2822594 - 2823559 | 36122.8 |
| duf2723 domain-containing protein | FBD94_11125 | Not Available | Negative | 2823773 - 2826802 | 114078.0 |
| Trna-gln | Not Available | Not Available | Positive | 2827389 - 2827462 | Not Available |
| ribose-phosphate pyrophosphokinase | FBD94_11135 | Not Available | Positive | 2827532 - 2828473 | 34196.5 |
| 50s ribosomal protein l25/general stress protein ctc | FBD94_11140 | Not Available | Positive | 2828501 - 2829079 | 21251.2 |
| aminoacyl-trna hydrolase | FBD94_11145 | Not Available | Positive | 2829162 - 2829722 | 20593.0 |
| response regulator | FBD94_11150 | Not Available | Negative | 2829712 - 2831304 | 59426.5 |
| protein-glutamate o-methyltransferase cher | FBD94_11155 | Not Available | Negative | 2831337 - 2832161 | 31821.0 |
| response regulator | FBD94_11160 | Not Available | Negative | 2832163 - 2835648 | 130576.0 |
| response regulator transcription factor | FBD94_11165 | Not Available | Negative | 2835747 - 2836430 | 25885.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

