Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | FBD94_10970 | Not Available | Negative | 2780369 - 2780788 | 15036.7 |
| bifunctional oligoribonuclease/pap phosphatase nrna | FBD94_10975 | Not Available | Positive | 2780932 - 2781942 | 37700.9 |
| peptidylprolyl isomerase | FBD94_10980 | Not Available | Positive | 2782008 - 2783012 | 35606.0 |
| tatd family deoxyribonuclease | FBD94_10985 | Not Available | Positive | 2783125 - 2783892 | 29006.8 |
| type i asparaginase | FBD94_10990 | Not Available | Positive | 2783895 - 2784911 | 37809.7 |
| mbl fold metallo-hydrolase | FBD94_10995 | Not Available | Positive | 2784982 - 2786397 | 51587.0 |
| alpha/beta hydrolase | FBD94_11000 | Not Available | Negative | 2786394 - 2787386 | 36957.8 |
| polyprenyl synthetase family protein | FBD94_11005 | Not Available | Positive | 2787461 - 2788432 | 36246.0 |
| deor/glpr transcriptional regulator | FBD94_11010 | Not Available | Negative | 2788443 - 2789207 | 27614.4 |
| glycerol-3-phosphate dehydrogenase/oxidase | FBD94_11015 | Not Available | Positive | 2789408 - 2791021 | 58273.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

