Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | FBD94_10720 | Not Available | Positive | 2721963 - 2722331 | 13866.6 |
| pspc domain-containing protein | FBD94_10725 | Not Available | Positive | 2722328 - 2723866 | 58448.4 |
| carboxypeptidase regulatory-like domain-containing protein | FBD94_10730 | Not Available | Negative | 2723940 - 2726666 | 100911.0 |
| nad(p)h-dependent oxidoreductase | FBD94_10735 | Not Available | Negative | 2726840 - 2727472 | 23365.8 |
| long-chain fatty acid transporter | FBD94_10740 | Not Available | Positive | 2727735 - 2728940 | 43022.3 |
| g-d-s-l family lipolytic protein | FBD94_10745 | Not Available | Positive | 2728959 - 2730245 | 44435.0 |
| pterin-4-alpha-carbinolamine dehydratase | FBD94_10750 | Not Available | Negative | 2730266 - 2730526 | 10360.5 |
| peptide-methionine (s)-s-oxide reductase msra | FBD94_10755 | Not Available | Negative | 2730598 - 2731197 | 22688.2 |
| isopenicillin n synthase family oxygenase | FBD94_10760 | Not Available | Positive | 2731445 - 2732407 | 36286.1 |
| hypothetical protein | FBD94_10765 | Not Available | Negative | 2732573 - 2733709 | 44362.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

