Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_10670 | Not Available | Negative | 2714395 - 2715036 | 23940.6 |
| Trna-val | Not Available | Not Available | Positive | 2715526 - 2715603 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2715648 - 2715725 | Not Available |
| dna repair protein reco | FBD94_10685 | Not Available | Negative | 2715854 - 2716579 | 28246.4 |
| diacylglycerol kinase family protein | FBD94_10690 | Not Available | Negative | 2716569 - 2716928 | 12861.4 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | FBD94_10695 | Not Available | Positive | 2716973 - 2717968 | 36656.2 |
| hypothetical protein | FBD94_10700 | Not Available | Negative | 2717965 - 2718270 | 11596.2 |
| duf2130 domain-containing protein | FBD94_10705 | Not Available | Negative | 2718277 - 2719506 | 48023.5 |
| metal-dependent transcriptional regulator | FBD94_10710 | Not Available | Negative | 2719608 - 2720270 | 25035.4 |
| hypothetical protein | FBD94_10715 | Not Available | Positive | 2720392 - 2721534 | 41695.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

