Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt domain-containing protein | FBD94_10620 | Not Available | Positive | 2701534 - 2702151 | 23658.6 |
| dehydrogenase | FBD94_10625 | Not Available | Negative | 2702154 - 2704130 | 73562.2 |
| iron-sulfur cluster-binding protein | FBD94_10630 | Not Available | Negative | 2704133 - 2705521 | 52108.0 |
| glycoside hydrolase family 88 protein | FBD94_10635 | Not Available | Negative | 2705660 - 2706880 | 45890.8 |
| cytochrome c | FBD94_10640 | Not Available | Negative | 2706883 - 2707332 | 15932.8 |
| sorbosone dehydrogenase | FBD94_10645 | Not Available | Negative | 2707342 - 2708625 | 47244.4 |
| glycosyl hydrolase | FBD94_10650 | Not Available | Negative | 2708715 - 2709860 | 43417.1 |
| atp-binding protein | FBD94_10655 | Not Available | Positive | 2710141 - 2710962 | 30031.5 |
| phospholipase c, phosphocholine-specific | FBD94_10660 | Not Available | Positive | 2711068 - 2713611 | 94532.6 |
| osmc family peroxiredoxin | FBD94_10665 | Not Available | Positive | 2713674 - 2714150 | 17680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

