Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | FBD94_10570 | Not Available | Positive | 2684821 - 2685027 | 7203.89 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | FBD94_10575 | Not Available | Positive | 2685069 - 2686523 | 52680.8 |
| lysm peptidoglycan-binding domain-containing protein | FBD94_10580 | Not Available | Positive | 2686592 - 2687815 | 45959.3 |
| nadp-dependent malic enzyme | FBD94_10585 | Not Available | Positive | 2687890 - 2690205 | 84804.3 |
| holliday junction branch migration protein ruva | FBD94_10590 | Not Available | Positive | 2690208 - 2690792 | 21182.9 |
| cell surface protein spra | FBD94_10595 | Not Available | Positive | 2690796 - 2697986 | 270197.0 |
| glycine cleavage system protein gcvh | FBD94_10600 | Not Available | Positive | 2698090 - 2698470 | 13658.0 |
| glycine cleavage system protein h | FBD94_10605 | Not Available | Positive | 2698474 - 2698878 | 15455.1 |
| ferrous iron transport protein a | FBD94_10610 | Not Available | Positive | 2699181 - 2699396 | 7751.75 |
| ferrous iron transport protein b | FBD94_10615 | Not Available | Positive | 2699401 - 2701518 | 78623.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

