Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | FBD94_10515 | Not Available | Negative | 2675479 - 2675970 | 18938.6 |
| yafy family transcriptional regulator | FBD94_10520 | Not Available | Negative | 2676066 - 2676758 | 27229.9 |
| amidohydrolase | FBD94_10525 | Not Available | Positive | 2676843 - 2678021 | 43710.5 |
| nitronate monooxygenase | FBD94_10530 | Not Available | Positive | 2678040 - 2678987 | 33533.2 |
| acylphosphatase | FBD94_10535 | Not Available | Positive | 2679002 - 2679274 | 10076.1 |
| polysaccharide biosynthesis protein | FBD94_10540 | Not Available | Positive | 2679275 - 2680747 | 55749.8 |
| dutp diphosphatase | FBD94_10545 | Not Available | Positive | 2680744 - 2681175 | 15599.7 |
| tetratricopeptide repeat protein | FBD94_10550 | Not Available | Positive | 2681176 - 2682237 | 39991.3 |
| duf4292 domain-containing protein | FBD94_10555 | Not Available | Positive | 2682215 - 2683006 | 29254.5 |
| peptidase m23 | FBD94_10560 | Not Available | Positive | 2683029 - 2684363 | 49173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

