Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic-type acetolactate synthase large subunit | FBD94_00975 | Not Available | Negative | 230120 - 231859 | 63200.9 |
| dihydroxy-acid dehydratase | FBD94_00980 | Not Available | Negative | 231896 - 233593 | 59846.0 |
| branched-chain amino acid transaminase | FBD94_00985 | Not Available | Negative | 233632 - 234522 | 33363.0 |
| atp synthase f1 subunit epsilon | FBD94_00990 | Not Available | Negative | 235032 - 235274 | 8500.52 |
| f0f1 atp synthase subunit beta | FBD94_00995 | Not Available | Negative | 235340 - 236845 | 54301.1 |
| sdr family oxidoreductase | FBD94_01000 | Not Available | Positive | 237063 - 237968 | 33453.1 |
| redoxin domain-containing protein | FBD94_01005 | Not Available | Positive | 238159 - 238623 | 17118.3 |
| Trna-arg | Not Available | Not Available | Positive | 238723 - 238796 | Not Available |
| recombinase family protein | FBD94_01015 | Not Available | Negative | 239155 - 240789 | 63654.6 |
| hypothetical protein | FBD94_01020 | Not Available | Positive | 240964 - 244005 | 117710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

