Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | FBD94_10410 | Not Available | Negative | 2648833 - 2649669 | 32386.3 |
| abc transporter permease | FBD94_10420 | Not Available | Negative | 2650906 - 2651769 | 32949.2 |
| glycosyltransferase family 4 protein | FBD94_10425 | Not Available | Negative | 2651753 - 2652883 | 42569.3 |
| upxy family transcription antiterminator | FBD94_10430 | Not Available | Negative | 2653004 - 2653516 | 19587.1 |
| polysaccharide biosynthesis tyrosine autokinase | FBD94_10435 | Not Available | Negative | 2653495 - 2655855 | 88363.1 |
| polysaccharide export protein | FBD94_10440 | Not Available | Negative | 2655855 - 2656682 | 31169.2 |
| glycosyltransferase | FBD94_10445 | Not Available | Positive | 2656725 - 2657474 | 28238.9 |
| histidinol phosphatase | FBD94_10450 | Not Available | Positive | 2657485 - 2658210 | 27955.2 |
| l-rhamnose/proton symporter rhat | FBD94_10455 | Not Available | Positive | 2658284 - 2659363 | 39224.6 |
| bifunctional aldolase/short-chain dehydrogenase | FBD94_10460 | Not Available | Positive | 2659388 - 2661508 | 76722.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

