Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2584371 - 2584457 | Not Available |
| cardiolipin synthase | FBD94_10115 | Not Available | Positive | 2584616 - 2586070 | 55339.3 |
| glycoside hydrolase family 25 protein | FBD94_10120 | Not Available | Negative | 2586099 - 2587016 | 35534.7 |
| dipeptidase | FBD94_10125 | Not Available | Negative | 2587176 - 2588546 | 50405.1 |
| duf4091 domain-containing protein | FBD94_10130 | Not Available | Negative | 2588577 - 2590310 | 66728.9 |
| atp-dependent dna helicase | FBD94_10135 | Not Available | Positive | 2590697 - 2593009 | 87784.5 |
| duf4290 domain-containing protein | FBD94_10140 | Not Available | Positive | 2593220 - 2593900 | 26381.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | FBD94_10145 | Not Available | Positive | 2593937 - 2595262 | 48132.1 |
| pyridoxal-phosphate dependent enzyme | FBD94_10150 | Not Available | Negative | 2595396 - 2596757 | 50217.2 |
| dna-protecting protein dpra | FBD94_10155 | Not Available | Negative | 2596910 - 2598001 | 40235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

