Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | FBD94_10010 | Not Available | Negative | 2554939 - 2555439 | 17821.9 |
| thioredoxin domain-containing protein | FBD94_10015 | Not Available | Negative | 2555451 - 2557472 | 76632.5 |
| dipeptide epimerase | FBD94_10020 | Not Available | Positive | 2557555 - 2558652 | 40655.5 |
| ahpc/tsa family protein | FBD94_10025 | Not Available | Negative | 2558719 - 2559852 | 41412.1 |
| duf4465 domain-containing protein | FBD94_10030 | Not Available | Negative | 2559873 - 2560694 | 30273.1 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_10035 | Not Available | Negative | 2560700 - 2562112 | 53298.7 |
| tonb-dependent receptor | FBD94_10040 | Not Available | Negative | 2562130 - 2565717 | 132353.0 |
| duf4974 domain-containing protein | FBD94_10045 | Not Available | Negative | 2565870 - 2567066 | 44304.7 |
| rna polymerase sigma factor | FBD94_10050 | Not Available | Negative | 2567125 - 2567733 | 23611.8 |
| hypothetical protein | FBD94_10055 | Not Available | Negative | 2567825 - 2568007 | 6802.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

