Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | FBD94_09960 | Not Available | Negative | 2546000 - 2546578 | 21965.5 |
| hypothetical protein | FBD94_09965 | Not Available | Negative | 2546630 - 2547196 | 21736.7 |
| atp-binding cassette domain-containing protein | FBD94_09970 | Not Available | Positive | 2547288 - 2548913 | 61324.9 |
| hypothetical protein | FBD94_09975 | Not Available | Negative | 2549096 - 2549992 | 35181.6 |
| crp/fnr family transcriptional regulator | FBD94_09980 | Not Available | Positive | 2550252 - 2550827 | 22303.8 |
| nad-dependent epimerase/dehydratase family protein | FBD94_09985 | Not Available | Positive | 2550912 - 2551928 | 37257.7 |
| abc transporter atp-binding protein | FBD94_09990 | Not Available | Positive | 2552162 - 2552791 | 22834.4 |
| ftsx-like permease family protein | FBD94_09995 | Not Available | Positive | 2552788 - 2554053 | 46203.7 |
| hypothetical protein | FBD94_10000 | Not Available | Positive | 2554077 - 2554520 | 16492.6 |
| transcriptional repressor | FBD94_10005 | Not Available | Positive | 2554523 - 2554942 | 15828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

