Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | FBD94_09860 | Not Available | Positive | 2521856 - 2522482 | 24453.3 |
| crp/fnr family transcriptional regulator | FBD94_09865 | Not Available | Positive | 2522485 - 2523129 | 25494.8 |
| hypothetical protein | FBD94_09870 | Not Available | Positive | 2523259 - 2523618 | 14043.5 |
| hypothetical protein | FBD94_09875 | Not Available | Positive | 2523955 - 2524446 | 18736.9 |
| hypothetical protein | FBD94_09880 | Not Available | Positive | 2524536 - 2524772 | 8500.27 |
| hypothetical protein | FBD94_09885 | Not Available | Positive | 2525041 - 2525274 | 8173.8 |
| hypothetical protein | FBD94_09890 | Not Available | Positive | 2525334 - 2526374 | 39601.9 |
| hypothetical protein | FBD94_09895 | Not Available | Positive | 2527112 - 2527354 | 8451.01 |
| tlpa family protein disulfide reductase | FBD94_09900 | Not Available | Negative | 2527608 - 2529128 | 57508.2 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_09905 | Not Available | Negative | 2529140 - 2530522 | 52013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

