Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_09810 | Not Available | Negative | 2513226 - 2513888 | 24215.3 |
| hypothetical protein | FBD94_09815 | Not Available | Negative | 2514096 - 2515295 | 45628.0 |
| hypothetical protein | FBD94_09820 | Not Available | Negative | 2515292 - 2515933 | 23652.3 |
| hypothetical protein | FBD94_09825 | Not Available | Positive | 2516440 - 2516622 | 6936.51 |
| helix-turn-helix transcriptional regulator | FBD94_09830 | Not Available | Positive | 2516672 - 2517658 | 38336.6 |
| sigma-70 family rna polymerase sigma factor | FBD94_09835 | Not Available | Negative | 2517892 - 2518401 | 19866.4 |
| rna polymerase sigma-70 factor | FBD94_09840 | Not Available | Negative | 2518415 - 2518960 | 21420.7 |
| rna polymerase subunit sigma-70 | FBD94_09845 | Not Available | Negative | 2518962 - 2519420 | 18201.0 |
| duf4974 domain-containing protein | FBD94_09850 | Not Available | Negative | 2519422 - 2520540 | 41406.7 |
| rna polymerase sigma-70 factor | FBD94_09855 | Not Available | Negative | 2520622 - 2521203 | 22823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

