Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2461 domain-containing protein | FBD94_09560 | Not Available | Negative | 2463911 - 2464612 | 26889.7 |
| hypothetical protein | FBD94_09565 | Not Available | Positive | 2464800 - 2465348 | 20916.7 |
| tetratricopeptide repeat protein | FBD94_09570 | Not Available | Negative | 2465522 - 2466298 | 28824.2 |
| protein batd | FBD94_09575 | Not Available | Negative | 2466291 - 2468105 | 65700.4 |
| tetratricopeptide repeat protein | FBD94_09580 | Not Available | Negative | 2468121 - 2468861 | 28702.7 |
| vwa domain-containing protein | FBD94_09585 | Not Available | Negative | 2468864 - 2469898 | 37991.3 |
| vwa domain-containing protein | FBD94_09590 | Not Available | Negative | 2469903 - 2470892 | 36564.9 |
| hypothetical protein | FBD94_09595 | Not Available | Negative | 2470897 - 2471883 | 37106.0 |
| duf58 domain-containing protein | FBD94_09600 | Not Available | Negative | 2471888 - 2472766 | 33651.7 |
| aaa family atpase | FBD94_09605 | Not Available | Negative | 2472768 - 2473796 | 38485.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

