Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | FBD94_00875 | Not Available | Positive | 204392 - 205201 | 29472.8 |
| rraa family protein | FBD94_00880 | Not Available | Positive | 205243 - 205986 | 27872.8 |
| neuraminidase | FBD94_00885 | Not Available | Positive | 205988 - 207319 | 50400.1 |
| glycosyl hydrolase | FBD94_00890 | Not Available | Positive | 207344 - 208480 | 43017.8 |
| hypothetical protein | FBD94_00895 | Not Available | Positive | 208470 - 210170 | 64076.9 |
| hypothetical protein | FBD94_00900 | Not Available | Positive | 210279 - 212102 | 68356.0 |
| tonb-dependent receptor | FBD94_00905 | Not Available | Positive | 212162 - 215341 | 115527.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_00910 | Not Available | Positive | 215353 - 217263 | 69805.7 |
| iclr family transcriptional regulator | FBD94_00915 | Not Available | Positive | 217347 - 218084 | 27341.4 |
| hypothetical protein | FBD94_00920 | Not Available | Negative | 218158 - 218568 | 14844.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

