Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | FBD94_09460 | Not Available | Negative | 2439924 - 2440772 | 31715.8 |
| rna polymerase sigma-70 factor | FBD94_09465 | Not Available | Positive | 2440906 - 2441589 | 26452.1 |
| fecr family protein | FBD94_09470 | Not Available | Positive | 2441674 - 2442783 | 41131.0 |
| susc/raga family tonb-linked outer membrane protein | FBD94_09475 | Not Available | Positive | 2442908 - 2446453 | 132247.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_09480 | Not Available | Positive | 2446465 - 2448006 | 57515.0 |
| hypothetical protein | FBD94_09485 | Not Available | Positive | 2448025 - 2449308 | 47110.1 |
| duf255 domain-containing protein | FBD94_09490 | Not Available | Positive | 2449340 - 2450545 | 44591.4 |
| ahpc/tsa family protein | FBD94_09495 | Not Available | Positive | 2450576 - 2451736 | 44288.5 |
| hypothetical protein | FBD94_09500 | Not Available | Positive | 2451739 - 2452275 | 19940.4 |
| pig-l family deacetylase | FBD94_09505 | Not Available | Positive | 2452460 - 2453116 | 25184.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

