Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | FBD94_09305 | Not Available | Positive | 2400187 - 2401161 | 35270.6 |
| tetr/acrr family transcriptional regulator | FBD94_09310 | Not Available | Negative | 2401398 - 2402069 | 26175.6 |
| dna mismatch repair protein | FBD94_09320 | Not Available | Negative | 2403080 - 2404489 | 53510.8 |
| abc transporter | FBD94_09325 | Not Available | Negative | 2405776 - 2408067 | 85863.8 |
| abc transporter atp-binding protein | FBD94_09330 | Not Available | Negative | 2408088 - 2409023 | 34980.6 |
| hypothetical protein | FBD94_09335 | Not Available | Negative | 2409058 - 2410557 | 56027.7 |
| duf4843 domain-containing protein | FBD94_09340 | Not Available | Negative | 2410586 - 2411296 | 26931.8 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_09345 | Not Available | Negative | 2411328 - 2412758 | 54772.2 |
| susc/raga family tonb-linked outer membrane protein | FBD94_09350 | Not Available | Negative | 2412771 - 2416364 | 133378.0 |
| duf4974 domain-containing protein | FBD94_09355 | Not Available | Negative | 2416523 - 2417605 | 39784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

